BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB009H12SP1|AL426123
(813 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1780 1612 0.0
>3x_Contig1780
Length = 27883
Score = 1612 bits (813), Expect = 0.0
Identities = 813/813 (100%)
Strand = Plus / Plus
Query: 1 atagagttttagaaattgcaaactaggagagaggaaccattgttaccggaaatagctcat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6799 atagagttttagaaattgcaaactaggagagaggaaccattgttaccggaaatagctcat 6858
Query: 61 atttgttttattttcgtactgtattagatctcagttattactttattatcgtctactact 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6859 atttgttttattttcgtactgtattagatctcagttattactttattatcgtctactact 6918
Query: 121 acttttaacgtataacattaaactttgctgtgtgttgctgtgtttaagctataaaatccc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6919 acttttaacgtataacattaaactttgctgtgtgttgctgtgtttaagctataaaatccc 6978
Query: 181 catacagacaaaaagaacaaggatcatttaagtagagcggaagaggaacggcgcaggaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6979 catacagacaaaaagaacaaggatcatttaagtagagcggaagaggaacggcgcaggaaa 7038
Query: 241 cttacacagcgttatcgtacttatatttacaaacgtttactgcagatttatcatatttag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7039 cttacacagcgttatcgtacttatatttacaaacgtttactgcagatttatcatatttag 7098
Query: 301 tgtacagaactaagaaaatccaagtggtaaagtgaacggtgcaacaagtagacgaataag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7099 tgtacagaactaagaaaatccaagtggtaaagtgaacggtgcaacaagtagacgaataag 7158
Query: 361 aagaaattgaaatattgcattcaagatgagtttatcagacgatgaagattttaacgacat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7159 aagaaattgaaatattgcattcaagatgagtttatcagacgatgaagattttaacgacat 7218
Query: 421 ctacggtgatgaaaataccgctcaaaccacggtgaacaataacgagtcgacttcatcaac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7219 ctacggtgatgaaaataccgctcaaaccacggtgaacaataacgagtcgacttcatcaac 7278
Query: 481 tgcaacatctacagataatcaaaataatactcaaagtaataataatcaaaataacgttag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7279 tgcaacatctacagataatcaaaataatactcaaagtaataataatcaaaataacgttag 7338
Query: 541 taatagctcgacagatgatcacaaagatcaagcttcaactaccaataaagaggctaatag 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7339 taatagctcgacagatgatcacaaagatcaagcttcaactaccaataaagaggctaatag 7398
Query: 601 tagtagcacaaacaccaccgcggcaacatctcaattagatcaactagcagctttacaggc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7399 tagtagcacaaacaccaccgcggcaacatctcaattagatcaactagcagctttacaggc 7458
Query: 661 tttgtcatctaacctgtcacaactgcaacagcaggttgcctcttcaaataatcaaccaga 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7459 tttgtcatctaacctgtcacaactgcaacagcaggttgcctcttcaaataatcaaccaga 7518
Query: 721 ttctaatcttgcatccaataatgacaaggctgaaaacaataacaaggaaaactacagtgc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7519 ttctaatcttgcatccaataatgacaaggctgaaaacaataacaaggaaaactacagtgc 7578
Query: 781 ttccgttcctgaaatgctgcagatgcctcaaat 813
|||||||||||||||||||||||||||||||||
Sbjct: 7579 ttccgttcctgaaatgctgcagatgcctcaaat 7611
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7043
Number of Sequences: 1807
Number of extensions: 7043
Number of successful extensions: 52
Number of sequences better than 1.0e-20: 1
length of query: 813
length of database: 10,358,551
effective HSP length: 16
effective length of query: 797
effective length of database: 10,329,639
effective search space: 8232722283
effective search space used: 8232722283
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)